GPCR Biology · Computational Science · AI Drug Discovery

GPCR Biology & AI-Enabled Drug Discovery

Integrating molecular simulation, structural biology and artificial intelligence to understand receptor function and accelerate therapeutic discovery.

GPCR mechanisms Molecular simulation AI / CADD
Research focus

From molecular mechanism to therapeutic discovery

A research program connecting receptor biology, computation and translational drug discovery.

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GPCR Mechanisms

Understanding activation, signalling, conformational dynamics and ligand recognition at molecular resolution.

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AI & Computational Drug Discovery

Developing computational and AI approaches for structure-based design, screening and molecular property prediction.

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Translational Science

Connecting mechanistic insight with the design and development of novel therapeutic molecules.

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Latest News

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cover story in JCTC
Publication

cover story in JCTC

Our recent work, which is entitled "Machine learning deciphered molecular mechanistics with accurate kinetic and thermodynamic prediction", has been published in ACS Journal of Chemical Theory and Computation as a cover strory. In this work, an integrated unsupervised dimension reduction model: uniform manifold approximation and projection (UMAP) with hierarchy density-based spatial clustering of applications with noise (HDBSCAN) is implemented, demonstrating robustness in preserving global and local data structures compared to traditional dimension reduction methods in the field of MD analysis area

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Recent Publications

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Zhang, S., Wu, C., Wang, S., Vogel, H., Li, Y. & Yuan, S.* Discovering Potent and Diverse Agonists for the β2-Adrenergic Receptor via Machine Learning. ACS Pharmacology & Translational Science 8, 4297–4311 (2025).
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Wang, X., Sun, K., Dong, J., Ge, Y., Liu, H., Jin, X., Pei, X., Wang, P., Yuan, S., Wang, B. & Yu, X.-A. Carrier-free nanoparticles based on natural products trigger dual "synergy and attenuation" for enhanced phototherapy of liver cancer. Materials Today Bio, 102278 (2025).
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Huang, S., Wang, S., Dong, J., Xu, M. & Yuan, S.* NeBULA: a web-based novel drug design platform for up-to-date bioisosteric replacement. Medicine in Drug Discovery (2025).
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Xu, M., Vogel, H. & Yuan, S.* Exploring Conformational Transitions in Biased and Balanced Ligand Binding of GLP-1R. Molecules 30, 3216 (2025).
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Dong, J., Wu, C., Lu, T., Wang, S., Zhan, W., Xu, M., Wang, B., Hu, Z., Vogel, H. & Yuan, S.* Enhancing multifunctional drug screening via artificial intelligence. Digital Discovery 4, 2012–2024 (2025).